Install rexml windows

Resolved my issue. Clear instructions. Easy to follow. No jargon. Pictures helped. Didn't match my screen. Incorrect instructions. Too technical. Not enough information. The first parameter is the attribute name, the second is the attribute value.

The method returns the attribute that was added. The text value of an element can easily be changed with Element. This is how it goes with attributes:. The second time we use the index 1 , meaning the first element in the document root will be deleted. We already used text nodes in the previous examples. In this section we will show some more advanced stuff with text nodes. REXML is a non-validating parser, and therefore is not required to expand external entities.

You see that the XML document, when printed, correctly contains the entity. As a result, the following problem occurs:. If you change the value of the entity, it will give a different result than you expect: more will be changed in the document than you want. If this is problematic for your application, you can set the :raw flag on any Text or Element node, even on the Document node. The entities in that node won't be processed, so you have to deal with entities yourself. Moreover, if you write one of these characters in a Text node or attribute, REXML converts them to their entity equivalent, e.

Stream parsing is faster than tree parsing. If speed matters, the stream parser can be handy. Messages posted via github will also not be answered. Web-Servers for phylogenetic placement of short sequence reads including alignment and visualization tools : advanced Swiss Server with pre-computed trees, please cite this paper when using it basic German Server without pre-computed trees, please cite this paper when using it. The code for the GUI is available here. Preliminary - works with DNA or AA, but not the two together yet, so not suitable for mixed-molecule data.

See the documentation with "perldoc. Guy Leonard at Exeter has updated his wrapper environment called easyRax Alexis has developed a couple of perls scripts A perl script for computing bootstrap branch lengths with RAxML. This script can be used to perform the following task with RAxML: Given a best-known ML tree, generate a number of Bootstrap replicates and just re-estimate the branch lengths for that given fixed tree topology on each Bootstrap replicate.

Let's assume that you have saved it in your home directory. Wait until the file has been downloaded. This should take a couple of seconds.

Go to the directory where you have saved standard-RAxML-master. If you have saved it in the home directory, just type cd and then press Enter in the terminal. Copy the file standard-RAxML-master.